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| Some publications using FAPROTAX
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| Gupta, Abhishek, Saha, Anumeha, Sar, Pinaki (2021) - Thermoplasmata and Nitrososphaeria as dominant archaeal members in acid mine drainage sediment of Malanjkhand Copper Project, India |
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| Archives of Microbiology 203:1833-1841. DOI:10.1007/s00203-020-02130-4 | |
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| Chen, Jun, Wu, Jinliang, Liu, Ming, Li, Liqing, Zhang, Weijun, Wang, Dongsheng, Ma, Teng (2021) - Bacterial community structure in the surface sediments of different habitats of Baiyangdian Lake, Northern China: effects of nutrient conditions |
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| Journal of Soils and Sediments 21:1866-1874. DOI:10.1007/s11368-021-02901-6 | |
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| Xu, Zhicheng, Ma, Yu, Zhang, Lanxia, Han, Yiyu, Yuan, Jing, Li, Guoxue, Luo, Wenhai (2021) - Relating bacterial dynamics and functions to gaseous emissions during composting of kitchen and garden wastes |
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| Science of The Total Environment 767:144210. DOI:10.1016/j.scitotenv.2020.144210 | |
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| Wang, Ning, Wang, Wenhui, Jiang, Yuji, Dai, Wei, Li, Pengfa, Yao, Dandan, Wang, Jieling, Shi, Yu, Cui, Zhongli, Cao, Hui, Dong, Yuanhua, Wang, Hui (2021) - Variations in bacterial taxonomic profiles and potential functions in response to the gut transit of earthworms (Eisenia fetida) feeding on cow manure |
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| Science of The Total Environment:147392. DOI:10.1016/j.scitotenv.2021.147392 | |
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| Huang, Xiaowu, Wei, Qiaoyan, Hong, Nian (2021) - Analysis of the microbiota associated with the blackening of activated sludge |
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| International Biodeterioration and Biodegradation 157:105140. DOI:10.1016/j.ibiod.2020.105140 | |
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| Xie, Ning, Zhong, Liping, Ouyang, Liao, Xu, Wang, Zeng, Qinghuai, Wang, Keju, Zaynab, Madiha, Chen, Huirong, Xu, Fangfang, Li, Shuangfei (2021) - Community composition and function of bacteria in activated sludge of municipal wastewater treatment plants |
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| Water 13. DOI:10.3390/w13060852 | |
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| Liu, Fang, Wu, Zhiyong, Zhang, Xiaoping, Xi, Gaolei, Zhao, Zhe, Lai, Miao, Zhao, Mingqin (2021) - Microbial community and metabolic function analysis of cigar tobacco leaves during fermentation |
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| MicrobiologyOpen 10:e1171. DOI:10.1002/mbo3.1171 | |
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| Yan, Xiao, Wang, Jianlei, Hu, Xuewu, Yu, Bingbing, Gao, Bowen, Li, Zilong, Chen, Jianhong, Zhang, Mingjiang, Liu, Xingyu (2021) - Contrasting effects of microbial fertiliser and organic fertiliser on soil bacterial community in coal mine dump of Inner Mongolia |
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| Chemistry and Ecology 37:384-398. DOI:10.1080/02757540.2021.1886283 | |
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| Eo, Jinu, Kim, Myung-Hyun, Kim, Min-Kyeong, Choi, Soon-Kun (2021) - Shift of dominant species in plant community and soil chemical properties shape soil bacterial community characteristics and putative functions: A case study on topographic variation in a mountain pasture |
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| Microorganisms 9. DOI:10.3390/microorganisms9050961 | |
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| Duan, Wanjun, Gao, Jingfeng, Wu, Zhilong, Dai, Huihui, Wang, Zhiqi, Li, Dingchang, Wang, Yuwei, Liu, Jie (2021) - Enhanced removal of antibiotic resistance genes by nanoscale iron-cobalt particles modified with Ginkgo biloba L. leaf: Combining Illumina MiSeq sequencing and oligotyping analysis |
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| Bioresource Technology 321:124453. DOI:10.1016/j.biortech.2020.124453 | |
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| Wu, Zhineng, Lyu, Honghong, Liang, Wei, Jing, Xiaohua, Wang, Yinbiao, Ma, Xiaodong (2021) - Microbial community in indoor dusts from university dormitories: Characteristics, potential pathogens and influence factors |
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| Atmospheric Pollution Research 12:321-333. DOI:10.1016/j.apr.2020.12.018 | |
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| Sun, Fulin, Xu, Zhantang (2021) - Significant differences in intestinal microbial communities in aquatic animals from an aquaculture area |
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| Journal of Marine Science and Engineering 9. DOI:10.3390/jmse9020104 | |
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| Yin, Yali, Wang, Yuqin, Li, Shixiong, Liu, Yan, Zhao, Wen, Ma, Yushou, Bao, Gensheng (2021) - Soil microbial character response to plant community variation after grazing prohibition for 10 years in a Qinghai-Tibetan alpine meadow |
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| Plant and Soil 458:175-189. DOI:10.1007/s11104-019-04044-7 | |
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| Xu, Tianle, Chen, Xiao, Hou, Yanhui, Zhu, Biao (2021) - Changes in microbial biomass, community composition and diversity, and functioning with soil depth in two alpine ecosystems on the Tibetan plateau |
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| Plant and Soil 459:137-153. DOI:10.1007/s11104-020-04712-z | |
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| Purkamo, Lotta, Kietäväinen, Riikka, Nuppunen-Puputti, Maija, Bomberg, Malin, Cousins, Claire (2020) - Ultradeep Microbial Communities at 4.4 km within Crystalline Bedrock: Implications for Habitability in a Planetary Context |
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| Life 10. DOI:10.3390/life10010002 | |
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| Zheng, Ying, Lin, Xinchun (2020) - Niche specialization and functional overlap of bamboo leaf and root microbiota |
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| Frontiers in Microbiology 11:2326. DOI:10.3389/fmicb.2020.571159 | |
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| Yang, Ji Xiang, Zhao, Bin, Zhang, Peng, Chen, Dan Yang, Chen, You Peng (2020) - Improvement in nitrogen removal and changes in community structure in a sequencing batch reactor bioaugmented with P. stutzeri strain XL-2 |
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| Bioresource Technology 317:123976. DOI:10.1016/j.biortech.2020.123976 | |
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| Cason, Errol D., Mahlomaholo, Bokang J., Taole, Mat{\v s}epo M., Abong, George Ooko, Vermeulen, Jan-G, de Smidt, Olga, Vermeulen, Marcele, Steyn, Laurinda, Valverde, Angel, Viljoen, Bennie (2020) - Bacterial and fungal dynamics during the fermentation process of sesotho, a traditional beer of Southern Africa |
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| Frontiers in Microbiology 11:1451. DOI:10.3389/fmicb.2020.01451 | |
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| Kolda, Anamarija, Gavrilovic, Ana, Jug-Dujakovic, Jurica, Ljubesic, Zrinka, El-Matbouli, Mansour, Lillehaug, Atle, Loncarevic, Semir, Peric, Lorena, Knezevic, Drazen, VukicLusic, Darija, Kapetanovic, Damir (2020) - Profiling of bacterial assemblages in the marine cage farm environment, with implications on fish, human and ecosystem health |
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| Ecological Indicators 118:106785. DOI:10.1016/j.ecolind.2020.106785 | |
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| Dong, Chunbo, Yao, Ting, Zhang, Zhiyuan, Chen, Wanhao, Liang, Jiangdong, Han, Yanfeng, Huang, Jianzhong, Deshmukh, Sunil K., Liang, Zongqi (2020) - Structure and function of bacterial microbiota in Eucommia ulmoides bark |
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| Current Microbiology 77:3623-3632. DOI:10.1007/s00284-020-02157-2 | |
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| Thomas, Shan P, Shanmuganathan, Bhavatharini, Jaiswal, Manoj Kumar, Kumaresan, Anbarasu, Sadasivam, Senthil Kumar (2019) - Legacy of a Pleistocene bacterial community: Patterns in community dynamics through changing ecosystems |
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| Microbiological Research. DOI:10.1016/j.micres.2019.06.001 | |
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| Yang, Yuzhan, Hou, Yang, Ma, Min, Zhan, Aibin (2019) - Potential pathogen communities in highly polluted river ecosystems: Geographical distribution and environmental influence |
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| Ambio. DOI:10.1007/s13280-019-01184-z | |
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| Zhang, Jiang, Chen, Ming, Huang, Jiafeng, Guo, Xinwu, Zhang, Yanjiao, Liu, Dan, Wu, Ribang, He, Hailun, Wang, Jun (2019) - Diversity of the microbial community and cultivable protease-producing bacteria in the sediments of the Bohai Sea, Yellow Sea and South China Sea |
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| PLOS ONE 14:e0215328. DOI:10.1371/journal.pone.0215328 | |
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| Xing, Yawei, Liu, Jianping, Lu, Fanggen, Wang, Li, Li, Ying, Ouyang, Chunhui (2019) - Dynamic distribution of gallbladder microbiota in rabbit at different ages and health states |
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| PLOS ONE 14:e0211828. DOI:10.1371/journal.pone.0211828 | |
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| Gu, Yunfu, Wei, Ye, Xiang, Quanju, Zhao, Ke, Yu, Xiumei, Zhang, Xiaoping, Li, Chaonan, Chen, Qiang, Xiao, Hong, Zhang, Xiaohong (2019) - C: N ratio shaped both taxonomic and functional structure of microbial communities in livestock and poultry breeding wastewater treatment reactor |
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| Science of The Total Environment 651:625-633. DOI:10.1016/j.scitotenv.2018.09.234 | |
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| Su, Hong, Mi, Shuofu, Peng, Xiaowei, Han, Yejun (2019) - The mutual influence between corrosion and the surrounding soil microbial communities of buried petroleum pipelines |
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| RSC Advances 9:18930-18940. DOI:10.1039/C9RA03386F | |
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| Zhao, Pengyu, Liu, Jinxian, Jia, Tong, Luo, Zhengming, Li, Cui, Chai, Baofeng (2019) - Assembly mechanisms of soil bacterial communities in subalpine coniferous forests on the Loess Plateau, China |
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| Journal of Microbiology 57:461-469. DOI:10.1007/s12275-019-8373-7 | |
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| Shen, Congcong, Ma, Dawei, Sun, Ruibo, Zhang, Benyao, Li, Delin, Ge, Yuan (2019) - Long-term stacking coal promoted soil bacterial richness associated with increased soil organic matter in coal yards of power plants |
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| Journal of Soils and Sediments:1-11. DOI:10.1007/s11368-019-02307-5 | |
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| Yan, Dingbo, Xia, Pinhua, Song, Xu, Lin, Tao, Cao, Haipeng (2019) - Community structure and functional diversity of epiphytic bacteria and planktonic bacteria on submerged macrophytes in Caohai Lake, southwest of China |
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| Annals of Microbiology:1-12. DOI:10.1007/s13213-019-01485-4 | |
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| Kong, Xiao, Jin, Decai, Tai, Xin, Yu, Hao, Duan, Guilan, Yan, Xiulan, Pan, Jiangang, Song, Junhua, Deng, Ye (2019) - Bioremediation of dibutyl phthalate in a simulated agricultural ecosystem by Gordonia sp. strain QH-11 and the microbial ecological effects in soil |
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| Science of The Total Environment 667:691-700. DOI:10.1016/j.scitotenv.2019.02.385 | |
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| Li, Hui, Zhang, YongYong, Yang, Shan, Wang, Zhirui, Feng, Xue, Liu, Heyong, Jiang, Yong (2019) - Variations in soil bacterial taxonomic profiles and putative functions in response to straw incorporation combined with N fertilization during the maize growing season |
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| Agriculture, Ecosystems and Environment 283:106578. DOI:10.1016/j.agee.2019.106578 | |
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| Hochstein, Rebecca, Zhang, Qian, Sadowsky, Michael J., Forbes, Valery E. (2019) - The deposit feeder Capitella teleta has a unique and relatively complex microbiome likely supporting its ability to degrade pollutants |
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| Science of The Total Environment 670:547-554. DOI:10.1016/j.scitotenv.2019.03.255 | |
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| Li, Wenyan, Xiao, Qiang, Hu, Chunsheng, Liu, Binbin, Sun, Ruibo (2019) - A comparison of the efficiency of different urease inhibitors and their effects on soil prokaryotic community in a short-term incubation experiment |
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| Geoderma 354:113877. DOI:10.1016/j.geoderma.2019.07.035 | |
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| Li, Yi, Zhang, Peisheng, Wang, Longfei, Wang, Chao, Zhang, Wenlong, Zhang, Huanjun, Niu, Lihua, Wang, Peifang, Cai, Minhui, Li, Wentao (2019) - Microstructure, bacterial community and metabolic prediction of multi-species biofilms following exposure to di-(2-ethylhexyl) phthalate (DEHP) |
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| Chemosphere 237:124382. DOI:10.1016/j.chemosphere.2019.124382 | |
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| Yu, Xiumei, Kang, Xia, Li, Yanmei, Cui, Yongliang, Tu, Weiguo, Shen, Tian, Yan, Min, Gu, Yunfu, Zou, Likou, Ma, Menggen, Xiang, Quanju, Zhao, Ke, Liang, Yueyang, Zhang, Xiaoping, Chen, Qiang (2019) - Rhizobia population was favoured during in situ phytoremediation of vanadium-titanium magnetite mine tailings dam using Pongamia pinnata |
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| Environmental Pollution 255:113167. DOI:10.1016/j.envpol.2019.113167 | |
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| Tan, Zhen, Dong, Wanting, Ding, Yaqun, Ding, Xiangdong, Zhang, Qin, Jiang, Li (2019) - Changes in cecal microbiota community of suckling piglets infected with porcine epidemic diarrhea virus |
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| PLOS ONE 14:e0219868. DOI:10.1371/journal.pone.0219868 | |
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| Zhou, Lei, Zhou, Yongqiang, Hu, Yang, Cai, Jian, Liu, Xin, Bai, Chengrong, Tang, Xiangming, Zhang, Yunlin, Jang, Kyoung-Soon, Spencer, Robert G. M., Jeppesen, Erik (2019) - Microbial production and consumption of dissolved organic matter in glacial ecosystems on the Tibetan Plateau |
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| Water Research 160:18-28. DOI:10.1016/j.watres.2019.05.048 | |
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| Zheng, Wanlin, Wen, Xianghua (2019) - How exogenous influent communities and environmental conditions affect activated sludge communities in the membrane bioreactor of a wastewater treatment plant |
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| Science of The Total Environment 692:622-630. DOI:10.1016/j.scitotenv.2019.07.310 | |
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| Huang, Qiong, Wang, Jianlei, Wang, Cong, Wang, Qing (2019) - The 19-years inorganic fertilization increased bacterial diversity and altered bacterial community composition and potential functions in a paddy soil |
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| Applied Soil Ecology 144:60-67. DOI:10.1016/j.apsoil.2019.07.009 | |
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| Qin, Mingsen, Shi, Guoxi, Miranda, Jean-Pascal, Liu, Yongjun, Meng, Yiming, Pan, Jianbin, Chai, Yuxing, Jiang, Shengjing, Zhou, Guoying, Feng, Huyuan, Zhang, Qi (2019) - Revegetation differentially influences microbial trophic groups in a Qinghai-Tibetan alpine steppe ecosystem |
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| Journal of Basic Microbiology. DOI:10.1002/jobm.201900149 | |
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| Merloti, Luis Fernando, Mendes, Lucas William, Pedrinho, Alexandre, de Souza, Leandro Fonseca, Ferrari, Beatriz Maria, Tsai, Siu Mui (2019) - Forest-to-agriculture conversion in Amazon drives soil microbial communities and N-cycle |
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| Soil Biology and Biochemistry 137:107567. DOI:10.1016/j.soilbio.2019.107567 | |
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| Deng,Jiaojiao, Zhang,Yan, Yin,You, Zhu,Xu, Zhu,Wenxu, Zhou,Yongbin, Marino,Bruno (2019) - Comparison of soil bacterial community and functional characteristics following afforestation in the semi-arid areas |
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| PeerJ 7:e7141. DOI:10.7717/peerj.7141 | |
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| Chun, Seong-Jun, Cui, Yingshun, Lee, Chang Soo, Cho, A Ra, Baek, Kiwoon, Choi, Ahyoung, Ko, So-Ra, Lee, Hyung-Gwan, Hwang, Seungwoo, Oh, Hee-Mock, Ahn, Chi-Yong (2019) - Characterization of Distinct CyanoHABs-Related Modules in Microbial Recurrent Association Network |
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| Frontiers in Microbiology 10:1637. DOI:10.3389/fmicb.2019.01637 | |
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| Bomberg, Malin, Claesson Liljedahl, Lillemor, Lamminmäki, Tiina, Kontula, Anne (2019) - Highly Diverse Aquatic Microbial Communities Separated by Permafrost in Greenland Show Distinct Features According to Environmental Niches |
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| Frontiers in Microbiology 10:1583. DOI:10.3389/fmicb.2019.01583 | |
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| Yang, Yonggang, Luo, Ou, Kong, Guannan, Wang, Bin, Li, Xiaojing, Li, Enze, Li, Jianjun, Liu, Feifei, Xu, Meiying (2018) - Deciphering the anode-enhanced azo dye degradation in anaerobic baffled reactors integrating with microbial fuel cells |
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| Frontiers in Microbiology 9:2117. DOI:10.3389/fmicb.2018.02117 | |
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| Thomas, Shan P., Shanmuganathan, Bhavatharini, Krishnan, Sivakumar, Goswami, Kartika, Dev, Maha, Jaiswal, Manoj Kumar, Kumaresan, Anbarasu, Sadasivam, Senthil Kumar (2018) - Metabarcoding of PalEnDNA as an efficient tool to recover ancient bacterial diversity |
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| Geomicrobiology Journal. DOI:10.1080/01490451.2018.1474507 | |
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| Cheng, Dandan, Tian, Zhongsai, Feng, Liang, Xu, Lin, Wang, Hongmei (2018) - Diversity analysis and function prediction of rhizo- and endophytic bacterial communities of Senecio vulgaris L. (Asteraceae) in an invasive range |
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| PeerJ Preprints 6:e26701v1. DOI:10.7287/peerj.preprints.26701v1 | |
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| Ge, Yuan, Shen, Congcong, Wang, Ying, Sun, Yao-Qin, Schimel, Joshua P., Gardea-Torresdey, Jorge L., Holden, Patricia A. (2018) - Carbonaceous nanomaterials have higher effects on soybean rhizosphere prokaryotic communities during the reproductive growth phase than during vegetative growth |
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| Environmental Science & Technology 52:6636-6646. DOI:10.1021/acs.est.8b00937 | |
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| Zhang, Xuwang, Qu, Yuanyuan, Ma, Qiao, Li, Shuzhen, Dai, Chunxiao, Lian, Shengyang, Zhou, Jiti (2018) - Performance and Microbial Community Analysis of Bioaugmented Activated Sludge System for Indigo Production from Indole |
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| Applied Biochemistry and Biotechnology. DOI:10.1007/s12010-018-2879-z | |
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| Legrand, Fabienne, Picot, Adeline, Cobo-Diaz, JoséFrancisco, Carof, Matthieu, Chen, Wen, Le Floch, Gaétan (2018) - Effect of tillage and static abiotic soil properties on microbial diversity |
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| Applied Soil Ecology 132:135-145. DOI:10.1016/j.apsoil.2018.08.016 | |
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| Kumar, Amit, Ng, Daphne H. P., Wu, Yichao, Cao, Bin (2018) - Microbial Community Composition and Putative Biogeochemical Functions in the Sediment and Water of Tropical Granite Quarry Lakes |
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| Microbial Ecology. DOI:10.1007/s00248-018-1204-2 | |
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| Ross, Ashley A., Müller, Kirsten M., Weese, J. Scott, Neufeld, Josh D. (2018) - Comprehensive skin microbiome analysis reveals the uniqueness of human skin and evidence for phylosymbiosis within the class Mammalia |
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| Proceedings of the National Academy of Sciences 115:E5786-E5795. DOI:10.1073/pnas.1801302115 | |
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| Hu, Anyi, Li, Shuang, Zhang, Lanping, Wang, Hongjie, Yang, Jun, Luo, Zhuanxi, Rashid, Azhar, Chen, Shaoqing, Huang, Weixiong, Yu, Chang-Ping (2018) - Prokaryotic footprints in urban water ecosystems: A case study of urban landscape ponds in a coastal city, China |
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| Environmental Pollution. DOI:10.1016/j.envpol.2018.07.097 | |
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| Wang, Jingjing, Li, Qingqing, Xu, Song, Zhao, Wei, Lei, Yu, Song, Chunhui, Huang, Zhiyong (2018) - Traits-based integration of multi-species inoculants facilitates shifts of indigenous soil bacterial community |
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| Frontiers in Microbiology 9:1692. DOI:10.3389/fmicb.2018.01692 | |
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| Wei, Ziyan, Liu, Yangying, Feng, Kai, Li, Shuzhen, Wang, Shang, Jin, Decai, Zhang, Yu, Chen, Hongrui, Yin, Huaqun, Xu, Meiying, Deng, Ye (2018) - The divergence between fungal and bacterial communities in seasonal and spatial variations of wastewater treatment plants |
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| Science of The Total Environment 628:969-978. DOI:10.1016/j.scitotenv.2018.02.003 | |
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| Zhou, Hao, Wang, Guochen, Wu, Minghuo, Xu, Weiping, Zhang, Xuwang, Liu, Lifen (2018) - Phenol removal performance and microbial community shift during pH shock in a moving bed biofilm reactor (MBBR) |
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| Journal of Hazardous Materials 351:71-79. DOI:10.1016/j.jhazmat.2018.02.055 | |
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| Gao, Gui-Feng, Li, Peng-Fei, Zhong, Jia-Xin, Shen, Zhi-Jun, Chen, Juan, Li, Yun-Tao, Isabwe, Alain, Zhu, Xue-Yi, Ding, Qian-Su, Zhang, Shan, others (2018) - Spartina alterniflora invasion alters soil bacterial communities and enhances soil N2O emissions by stimulating soil denitrification in mangrove wetland |
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| Science of The Total Environment. DOI:10.1016/j.scitotenv.2018.10.277 | |
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| Zhou, Lijie, Xu, Xiaoyin, Xia, Siqing (2018) - Effects of sulfate on simultaneous nitrate and selenate removal in a hydrogen-based membrane biofilm reactor for groundwater treatment: Performance and biofilm microbial ecology |
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| Chemosphere 211:254-260. DOI:10.1016/j.chemosphere.2018.07.092 | |
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| Varela, BJ, Lesbarrères, D, Ibáñez, R, Green, DM (2018) - Environmental and host effects on skin bacterial community composition in Panamanian frogs |
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| Frontiers in Microbiology 9:298. DOI:10.3389/fmicb.2018.00298 | |
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| Wu, Yang, Wang, Yuexing, De Costa, Yashika G, Tong, Zhida, Cheng, Jay J, Zhou, Lijie, Zhuang, Wei-Qin, Yu, Ke (2018) - The co-existence of anammox genera in an expanded granular sludge bed reactor with biomass carriers for nitrogen removal |
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| Applied Microbiology and Biotechnology:1-12. DOI:10.1007/s00253-018-9494-3 | |
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| Chen, Xun Wen, Wong, James Tsz Fung, Chen, Zhan Ting, Tang, Thomas Wui Lung, Guo, Hao Wen, Leung, Anna Oi Wah, Ng, Charles Wang Wai, Wong, Ming Hung (2018) - Effects of biochar on the ecological performance of a subtropical landfill |
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| Science of The Total Environment 644:963-975. DOI:10.1016/j.scitotenv.2018.06.379 | |
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| Zhang, Rui, Wang, Lutian, Chen, Ping, Pu, Yuewu (2018) - Shifts in microbial community structure and diversity in a novel waterfall biofilm reactor combined with MBBR under light and dark conditions |
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| RSC Advances 8:37462-37471. DOI:10.1039/C8RA07039C | |
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| Wei, Hua, Peng, Changhui, Yang, Bin, Song, Hanxiong, Li, Quan, Jiang, Lin, Wei, Gang, Wang, Kefeng, Wang, Hui, Liu, Shirong, others (2018) - Contrasting soil bacterial community, diversity, and function in two forests in China |
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| Frontiers in microbiology 9:1693. DOI:10.3389/fmicb.2018.01693 | |
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| Schöps, Ricardo, Goldmann, Kezia, Herz, Katharina, Lentendu, Guillaume, Schöning, Ingo, Bruelheide, Helge, Wubet, Tesfaye, Buscot, Fran{\c{c}}ois (2018) - Land-use intensity rather than plant functional identity shapes bacterial and fungal rhizosphere communities |
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| Frontiers in microbiology 9. DOI:10.3389/fmicb.2018.02711 | |
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| Yang, Yonggang, Luo, Ou, Kong, Guannan, Li, Xiaojing, Li, Enze, Wang, Bin, Liu, Feifei, Li, Jianjun, Xu, Meiying (2018) - Anode respiration enhances azo dye removal in anaerobic baffled reactors by increasing microbial activity and respiratory versatility |
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| Frontiers in Microbiology 9:2117. DOI:10.3389/fmicb.2018.02117 | |
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| Kumar, M Senthil, Slud, Eric V, Okrah, Kwame, Hicks, Stephanie C, Hannenhalli, Sridhar, Bravo, Hector Corrada (2018) - Analysis and correction of compositional bias in sparse sequencing count data |
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| BMC genomics 19:799. DOI:10.1186/s12864-018-5160-5 | |
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| Zheng, Xiafei, Zhang, Dongdong, Qin, Jianguang, Wang, Yan (2018) - The effect of C/N ratio on bacterial community and water quality in a mussel-fish integrated system |
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| Aquaculture Research 49:1699-1708. DOI:10.1111/are.13626 | |
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| Wang, Yu, Sun, Jinsheng, Fang, Enjun, Guo, Biao, Dai, Yuanyuan, Gao, Yan, Wang, Hong, Zhang, Xue, Xu, Xiaofu, Ying, Yu, others (2018) - Impact of artificial reefs on sediment bacterial structure and function in Bohai Bay |
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| Canadian journal of microbiology. DOI:10.1139/cjm-2018-0157 | |
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| Pan, Hanping, Yang, Xunan, Zhong, Yuming, Xu, Meiying, Sun, Guoping (2018) - Response of environmental variables and microbial community to sodium percarbonate addition to contaminated sediment |
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| Chemosphere 211:500-509. DOI:10.1016/j.chemosphere.2018.07.120 | |
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| Zhang, Yanmin, Wu, Geng, Jiang, Hongchen, Yang, Jian, She, Weiyu, Khan, Inayat, Li, Wenjun (2018) - Abundant and rare microbial biospheres respond differently to environmental and spatial factors in Tibetan hot springs |
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| Frontiers in microbiology 9:2096. DOI:10.3389/fmicb.2018.02096 | |
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| Ruuskanen, Matti O, Pierre, Kyra A St, Louis, Vincent L St, Aris-Brosou, Stéphane, Poulain, Alexandre J (2018) - Physicochemical drivers of microbial community structure in sediments of Lake Hazen, Nunavut, Canada |
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| Frontiers in Microbiology 9:1138. DOI:10.3389/fmicb.2018.01138 | |
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| Zhang, Xiaoying, Hu, Bill X, Ren, Hejun, Zhang, Jin (2018) - Composition and functional diversity of microbial community across a mangrove-inhabited mudflat as revealed by 16S rDNA gene sequences |
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| Science of the Total Environment 633:518-528. DOI:10.1016/j.scitotenv.2018.03.158 | |
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| Chang, Chunling, Chen, Wen, Luo, Shasha, Ma, Lina, Li, Xiujun, Tian, Chunjie (2018) - Rhizosphere microbiota assemblage associated with wild and cultivated soybeans grown in three types of soil suspensions |
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| Archives of Agronomy and Soil Science 65:74-87. DOI:10.1080/03650340.2018.1485147 | |
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| Chen, Wen, Wilkes, Graham, Khan, Izhar UH, Pintar, Katarina DM, Thomas, Janis L, Lévesque, C André, Chapados, Julie T, Topp, Edward, Lapen, David R (2018) - Aquatic bacterial communities associated with land use and environmental factors in agricultural landscapes using a metabarcoding approach |
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| Frontiers in Microbiology 9. DOI:10.3389/fmicb.2018.02301 | |
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| Yang, Yuzhan, Gao, Yangchun, Huang, Xuena, Ni, Ping, Wu, Yueni, Deng, Ye, Zhan, Aibin (2018) - Adaptive shifts of bacterioplankton communities in response to nitrogen enrichment in a highly polluted river |
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| Environmental Pollution 245:290-299. DOI:10.1016/j.envpol.2018.11.002 | |
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| Fraser, Andrea, Zhang, Yue, Sakowski, Eric, Preheim, Sarah (2018) - Dynamics and Functional Potential of Stormwater Microorganisms Colonizing Sand Filters |
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| Water 10:1065. DOI:10.3390/w10081065 | |
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| Khan, MA Wadud, Bohannan, Brendan JM, Nüsslein, Klaus, Tiedje, James M, Tringe, Susannah G, Parlade, Eloi, Barberán, Albert, Rodrigues, Jorge LM (2018) - Deforestation impacts network co-occurrence patterns of microbial communities in Amazon soils |
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| FEMS microbiology ecology 95:fiy230. DOI:10.1093/femsec/fiy230 | |
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| Osborne, Owen G., De-Kayne, Rishi, Bidartondo, Martin I., Hutton, Ian, Baker, William J., Turnbull, Colin G. N., Savolainen, Vincent (2017) - Arbuscular mycorrhizal fungi promote coexistence and niche divergence of sympatric palm species on a remote oceanic island |
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| New Phytologist. DOI:10.1111/nph.14850 | |
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| Kvas, S., Rahn, J., Engel, K., Neufeld, J. D., Villeneuve, P. J., Trevors, J. T., Lee, H., Scroggins, R. P., Beaudette, L. A. (2017) - Development of a microbial test suite and data integration method for assessing microbial health of contaminated soil |
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| Journal of Microbiological Methods 143:66-77. DOI:10.1016/j.mimet.2017.10.004 | |
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| Comeau, André M, Douglas, Gavin M, Langille, Morgan GI (2017) - Microbiome Helper: a Custom and Streamlined Workflow for Microbiome Research |
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| mSystems 2:e00127-16. DOI:10.1128/mSystems.00127-16 | |
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| Schiff, SL, Tsuji, JM, Wu, Lingling, Venkiteswaran, JJ, Molot, LA, Elgood, RJ, Paterson, MJ, Neufeld, Josh D (2017) - Millions of boreal shield lakes can be used to probe archaean ocean biogeochemistry |
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| Scientific Reports 7:46708. DOI:10.1038/srep46708 | |
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| Louca, S., Jacques, S. M. S., Pires, A. P. F., Leal, J. S., González, A. L., Doebeli, M., Farjalla, V. F. (2017) - Functional structure of the bromeliad tank microbiome is strongly shaped by local geochemical conditions |
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| Environmental Microbiology 19:3132-3151. DOI:10.1111/1462-2920.13788 | |
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| Louca, S, Jacques, S. M. S., Pires, A. P. F., Leal, J. S., Srivastava, D. S., Parfrey, L. W., Farjalla, V. F., Doebeli, M. (2016) - High taxonomic variability despite stable functional structure across microbial communities |
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| Nature Ecology & Evolution 1:0015. DOI:10.1038/s41559-016-0015 | |
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| Louca, S., Parfrey, L.W., Doebeli, M. (2016) - Decoupling function and taxonomy in the global ocean microbiome |
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| Science 353:1272-1277. DOI:10.1126/science.aaf4507 | |
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Louca lab. Department of Biology, University of Oregon, Eugene, USA
© 2026 Stilianos Louca all rights reserved
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